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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015796738.1_cds_XP_016451245.1_4487
CDS Infomation

[gene=LOC107775947] [db_xref=GeneID:107775947] [protein=probable pectinesterase/pectinesterase inhibitor 51] [protein_id=XP_016451245.1] [location=join(148982..149978,151023..151708)] [gbkey=CDS]
Sequence

ATGTATAGCAGAAAACCTGTAAAACCCTCACTATTTCGAAAATTTAAGTTTCTTTTCATT
TCAATGGCTTCCTTTTTCACACTAACACTCCTCTCTTTACTTCTCTTCATCTCAATCTCC
TCCGCCGCTCGCCACCACAATTCGCCGAAGTTATCCACGACGCCGTCGATTGCGGTTGAG
ATCCGTGGAGCTTGCAAGGCATCGCGGGACCCACCAACATGCGAGTCTGTATTAACGGAC
TCGGGCAACTTGCCGTCTAAGCTGACGACGCCGTTAATCATTCAATCCGCCGTTAAAGTC
TCTTCGCAGAACAACGACAAAGCGAAAGACATGGTGAAAGCAATCATGGACGCGTCCACA
GCCAATCAGAACCGTACCGATGCTGCGAAGGTGTGTATGGAGGTGCTCGGGTACGCGGAG
TACCGGGTCGGGTTAGCGGGTCAGGCAGTAACACGTGGCGAGCTAAAAAACTCACGCGCG
TGGATGAGCGCTGTGATGGTTTACCAGTACGACTGCTGGTCCGCTTTAAAGTACGTTAAC
GGAACCTCACAAGTGTCACAAACGATGTCGTTTTTGAACTCTTTAATCGGGTACAGCAGC
AGCGCATTGGGTATGCTGGTGAATTACGATATTTATGGGGAAAATACCGGGTCATGGACC
CCACCAAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTCAAGTAAAGGGT
GGGGTGCCATCCGGGTTGAAACCGGACGTGACTGTGTGTAAGGAAGGAGGTTGTGATTAT
AAGACTGTGCAGGAAGCGGTGAATGCTGCACCAGATAATCAGGTGACCCGGAAGTTTGTG
ATATGGATCAAAGCCGGGTTGTATGAGGAGAAAGTTCGGGTCCCATTGGAGAAGAAGAAT
GTGGTATTTTTGGGTGATGGCATGGGCAAAACTGTTATTACCGGTTCGTTGAATGTTGGT
ATGGCGGGTGTCACTACTTATGAAACTGCAACTGTTGGAGTTGTTGGTGATGGATTCATG
GCCAGTGGCATCACCTTCCAAAACACTGCTGTTCCGGATGCTCACCAAGCTGTAGCATTC
CGATCCGACAGTGATCTTTCAGTTATAGAGAACTGTGAATTCATTGGCAATCAAGACACC
TTATATGCCCATGCATTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGCAATGTCGAC
TTCATTTTTGGGAACTCTGCTGCATTCTTCCAAGAATGTGACATCTTAATTGCACCTCGA
CAACTCAATCCTGAAAAGGGAGAGAAAAATGCTGTGACTGCTCATGGCAGGATAGATCCT
GCACAGTCAACTGGCTTTGTCTTCCAAAATTGTTTGATCAATGGAACTGAACAATACATG
GCCCTATACTACAAGAAACCCAAGGTGCACAAAAATTTTCTAGGAAGGCCGTGGAAGGAG
TATTCGCGGACTGTCTTTATAGAATGTACTTTGGAGGCTCTTGTTTTAGCTGATGGGTGG
TTGCCCTGGAGCGGTGATTTCGCGTTGAAGACTCTTTACTATGGAGAATATAGAAATACT
GGTACCGGAGCTAATACAGCAGGACGAGTGCCATGGAGTAGCCAAATCCCAGCTGAACAT
GTTAACTCTTACTCTCTACAAAATTTCATTCAAGGGGATCAGTGGATTACTACTACTTCT
TGA

Peptide Sequence

PEP ID

XP_016451245.1
PEP Infomation

PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Nicotiana tabacum]
Sequence

MYSRKPVKPSLFRKFKFLFISMASFFTLTLLSLLLFISISSAARHHNSPKLSTTPSIAVE
IRGACKASRDPPTCESVLTDSGNLPSKLTTPLIIQSAVKVSSQNNDKAKDMVKAIMDAST
ANQNRTDAAKVCMEVLGYAEYRVGLAGQAVTRGELKNSRAWMSAVMVYQYDCWSALKYVN
GTSQVSQTMSFLNSLIGYSSSALGMLVNYDIYGENTGSWTPPKTERDGFWEGSGSGQVKG
GVPSGLKPDVTVCKEGGCDYKTVQEAVNAAPDNQVTRKFVIWIKAGLYEEKVRVPLEKKN
VVFLGDGMGKTVITGSLNVGMAGVTTYETATVGVVGDGFMASGITFQNTAVPDAHQAVAF
RSDSDLSVIENCEFIGNQDTLYAHALRQYYKSCRIQGNVDFIFGNSAAFFQECDILIAPR
QLNPEKGEKNAVTAHGRIDPAQSTGFVFQNCLINGTEQYMALYYKKPKVHKNFLGRPWKE
YSRTVFIECTLEALVLADGWLPWSGDFALKTLYYGEYRNTGTGANTAGRVPWSSQIPAEH
VNSYSLQNFIQGDQWITTTS

Transcript Sequence

Gene sequence data has not been registered.